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Bookkeeping

How to Reimburse Employee Expenses by e-Transfer in Canada

Approve the claim, separate reimbursements from allowances, handle GST/HST support, and match the completed e-Transfer to receipts and the bank.

TransferLog Team
Updated September 28, 2026
8 min read

To reimburse an employee by Interac e-Transfer, approve a documented expense claim, record the amount owed, send the exact approved amount, and match the completed transfer to the claim, receipts, and bank withdrawal. Review personal or unsupported amounts before payment and route any taxable benefit through payroll.

The e-Transfer is only the payment method. It does not determine whether an amount is a reimbursement, allowance, accountable advance, wage, or taxable benefit.

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Is an Employee Expense Reimbursement Taxable in Canada?

It depends on what is being repaid, not on whether the employer uses e-Transfer.

The CRA's Employers' Guide – Taxable Benefits and Allowances defines a reimbursement as an amount paid to repay expenses an employee incurred while carrying out employment duties. The employee must keep detailed records and give the employer supporting receipts or vouchers.

A payment that gives the employee a personal economic advantage can instead be a taxable benefit. If a benefit is taxable, the employer may have to calculate its value, make payroll deductions, and report it on the appropriate information slip. Use the CRA's current topic-specific guidance or qualified advice rather than assuming every amount labelled “reimbursement” is non-taxable.

Reimbursements compared with allowances, advances, and wages
Payment typeKey featureControl to keep
ReimbursementRepays actual, accounted-for employment expensesClaim, receipts, approval, and payment match
Accountable advancePaid before spending, with later vouchers and return of unused fundsAdvance balance and final settlement
AllowancePredetermined amount the employee need not account forPolicy, calculation, and taxable-benefit review
Wage or bonusRemuneration for employment rather than repayment of a costPayroll register, deductions, and wage statement

What Must the Employee Submit?

Use a consistent expense form or digital workflow. For each claim, collect:

  • employee, department, project, and expense-report number;
  • purchase date, supplier, description, and business purpose;
  • invoice, itemized receipt, mileage log, or other source document;
  • original currency and exchange-rate support when applicable;
  • amount paid, personal portion, and amount requested;
  • GST/HST and provincial tax shown on the source document;
  • expense category, approver, approval date, and approved amount; and
  • any missing-receipt explanation required by the business's policy.

The expense claim explains what the employee bought and why. The e-Transfer record shows how the approved amount was repaid. Neither record replaces the other.

How Do You Reimburse an Employee by e-Transfer?

1. Review the business purpose and documents

Confirm that the employee incurred the cost for employment duties and that the claim agrees with the source documents. A card statement or e-Transfer request may show an amount, but it often does not identify the goods or services or provide the information needed for a GST/HST claim.

If a receipt is missing, follow a written exception process. Record the supplier, date, amount, reason, business purpose, approval, and other available evidence. Do not recreate a receipt or infer sales tax from the total.

2. Separate business, personal, and policy-excluded amounts

Approve only the supported portion unless another treatment applies. Document how mixed travel, meals, telephone, vehicle use, foreign exchange, tips, or other shared costs were allocated.

If the employee is the primary beneficiary, or the purchase falls outside the employer's reimbursement policy, pause for a payroll or taxable-benefit decision instead of hiding it inside the expense total.

3. Classify the payment before sending it

Decide whether the amount is a reimbursement, accountable advance, allowance, taxable benefit, or wage. The label in the e-Transfer message does not settle this question.

The CRA's updated GST/HST Memorandum 9-4 says a reimbursement repays amounts spent and is fully accounted for with supporting vouchers or records. It separately describes an allowance as a predetermined amount the recipient need not account for.

4. Record the approved claim

The exact accounts depend on the chart of accounts and tax treatment. A common workflow is to record the supported expense and any eligible input tax credit when the claim is approved, with an amount payable to the employee. When the e-Transfer completes, reduce that payable and record the bank withdrawal.

This two-stage approach keeps approval separate from settlement. It also leaves an open balance when a transfer is still pending or when the approved amount is paid in instalments.

5. Calculate GST/HST from the source records

Do not apply a tax rate to the e-Transfer amount and call the result an input tax credit. Use the receipt, the reimbursement percentage, the business-use percentage, and the rules that apply to the expense.

The CRA's methods for ITCs on reimbursements explain actual-tax and factor methods. A partial reimbursement can require proration, and the chosen method generally has to be used consistently through the fiscal year. Meals and entertainment, exempt items, personal use, and restricted expenses may change the result.

6. Approve and send the exact amount

Record the approver and approved total before payment. Verify the employee's email address or mobile number through the employer's normal process, especially after an unexpected change request.

Use a short claim number in the message field if the financial institution permits it. Avoid sensitive payroll, tax, banking, health, or personal details in that message.

7. Confirm the transfer completed

Open the known banking app or website and match the final withdrawal, recipient, amount, date, and status. An initiated or pending notice does not prove that the employee received the money.

Keep the Interac reference and all failed attempts. If a transfer is cancelled, declined, expired, or replaced, leave the payable open until a completed payment clears it. The e-Transfer status and replacement workflow shows how to avoid counting both attempts.

8. Reconcile the reimbursement register

At least monthly, compare approved claims, employee payables, completed transfers, bank withdrawals, expense accounts, GST/HST working papers, and payroll decisions.

Investigate:

  • an approved claim with no completed payment;
  • a completed transfer with no approved claim;
  • duplicate transfers for one claim;
  • an amount that differs from approval;
  • an allowance posted as a reimbursement;
  • a personal amount recorded as a business expense; or
  • GST/HST recorded without adequate support.

How Should Common Reimbursement Edge Cases Be Recorded?

One claim is paid in several e-Transfers

Keep every real transfer as a separate payment row and link each to the same claim. Clear the employee payable only for the completed total.

One e-Transfer pays several approved claims

Preserve the actual transfer amount, then allocate it across the claims. The allocations should equal the bank withdrawal; do not invent several bank transactions.

The employee received an advance first

Track the advance as an open balance. Apply supported expenses against it and record any unused amount returned. The CRA memorandum treats an accountable advance as one supported by vouchers with unspent funds returned.

The receipt is in foreign currency

Keep the original currency and amount, the documented conversion source, the Canadian-dollar approval, and any separate fee. Do not infer the exchange rate from the reimbursement transfer.

The employee was overpaid

Keep the original payment and record the amount recoverable under the employer's policy. Link a returned e-Transfer to that balance instead of silently reducing an unrelated future claim.

The claimant is not an employee

Use the workflow that matches the actual relationship. A contractor's reimbursed costs may be part of an invoice, while a proprietor, partner, director, or shareholder payment can affect a different expense, equity, benefit, or loan account.

For an ordinary supplier purchase, follow how to record a business expense paid by e-Transfer. For wages, use the separate employee payroll e-Transfer guide.

How Does TransferLog Help With Reimbursement Records?

TransferLog organizes details found in supported incoming and outgoing Interac e-Transfer notification emails from connected Gmail, Outlook, and iCloud inboxes. You can search and filter outgoing records, assign categories, and export CSV or PDF on the Pro plan.

Use the export as the payment-notification side of the reimbursement register, then match it to approved claims, receipts, bank withdrawals, payroll decisions, and the general ledger. TransferLog does not read receipts, approve expenses, calculate GST/HST, determine taxable benefits, access bank accounts, send money, or run payroll.

Official Sources

  • CRA T4130: Employers' Guide – Taxable Benefits and Allowances
  • CRA GST/HST Memorandum 9-4: Reimbursements
  • CRA: Methods to calculate ITCs on reimbursements
  • CRA: Business records
  • Interac e-Transfer Terms of Use

This article provides general record-keeping information, not tax, payroll, legal, or accounting advice.

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